Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.28■□□□□ 0.36
CHATP28329 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CHATP28329 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHATP28329 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHATP28329 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.28■□□□□ 0.36
CHATP28329 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHATP28329 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHATP28329 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHATP28329 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHATP28329 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CHATP28329 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.27■□□□□ 0.36
CHATP28329 AC010141.2-201ENST00000452426 721 ntBASIC17.27■□□□□ 0.36
CHATP28329 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.27■□□□□ 0.36
CHATP28329 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.27■□□□□ 0.36
CHATP28329 AC120498.10-201ENST00000621827 505 ntBASIC17.27■□□□□ 0.36
CHATP28329 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.27■□□□□ 0.36
CHATP28329 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHATP28329 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.27■□□□□ 0.36
CHATP28329 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHATP28329 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHATP28329 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHATP28329 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.26■□□□□ 0.35
CHATP28329 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHATP28329 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.26■□□□□ 0.35
CHATP28329 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CHATP28329 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHATP28329 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHATP28329 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHATP28329 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHATP28329 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
CHATP28329 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHATP28329 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 IRS3P-201ENST00000223076 1006 ntBASIC17.25■□□□□ 0.35
CHATP28329 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHATP28329 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 MIR2861-201ENST00000636310 90 ntBASIC17.25■□□□□ 0.35
CHATP28329 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.25■□□□□ 0.35
CHATP28329 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.25■□□□□ 0.35
CHATP28329 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.25■□□□□ 0.35
CHATP28329 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHATP28329 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.25■□□□□ 0.35
CHATP28329 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.24■□□□□ 0.35
CHATP28329 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CHATP28329 AC142381.2-201ENST00000566120 298 ntBASIC17.24■□□□□ 0.35
CHATP28329 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHATP28329 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHATP28329 AC116050.2-201ENST00000612102 1779 ntBASIC17.24■□□□□ 0.35
CHATP28329 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CHATP28329 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHATP28329 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.24■□□□□ 0.35
CHATP28329 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHATP28329 TCF3P1-201ENST00000423021 1937 ntBASIC17.23■□□□□ 0.35
CHATP28329 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHATP28329 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHATP28329 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHATP28329 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.23■□□□□ 0.35
CHATP28329 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHATP28329 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHATP28329 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.23■□□□□ 0.35
CHATP28329 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CHATP28329 AC027612.3-201ENST00000413684 1047 ntBASIC17.23■□□□□ 0.35
CHATP28329 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms