Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH3P22223 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH3P22223 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDH3P22223 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH3P22223 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH3P22223 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CDH3P22223 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH3P22223 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDH3P22223 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.83■□□□□ 0.77
CDH3P22223 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH3P22223 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CDH3P22223 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH3P22223 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH3P22223 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDH3P22223 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH3P22223 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
CDH3P22223 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.82■□□□□ 0.76
CDH3P22223 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH3P22223 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 MCRIP2P1-201ENST00000394346 511 ntBASIC19.82■□□□□ 0.76
CDH3P22223 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.82■□□□□ 0.76
CDH3P22223 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.82■□□□□ 0.76
CDH3P22223 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.82■□□□□ 0.76
CDH3P22223 KRT18P6-201ENST00000555540 1265 ntBASIC19.82■□□□□ 0.76
CDH3P22223 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH3P22223 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH3P22223 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDH3P22223 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH3P22223 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH3P22223 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH3P22223 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH3P22223 CD99P1-205ENST00000527459 561 ntBASIC19.81■□□□□ 0.76
CDH3P22223 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 CYP2T3P-201ENST00000601990 817 ntBASIC19.81■□□□□ 0.76
CDH3P22223 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH3P22223 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDH3P22223 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDH3P22223 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH3P22223 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH3P22223 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH3P22223 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDH3P22223 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 AC097658.1-201ENST00000475555 843 ntBASIC19.8■□□□□ 0.76
CDH3P22223 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH3P22223 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDH3P22223 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CDH3P22223 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDH3P22223 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH3P22223 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDH3P22223 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.8■□□□□ 0.76
CDH3P22223 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDH3P22223 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH3P22223 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH3P22223 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH3P22223 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 DUSP5P2-201ENST00000426873 1033 ntBASIC19.79■□□□□ 0.76
CDH3P22223 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH3P22223 KRT17P1-201ENST00000399211 1546 ntBASIC19.79■□□□□ 0.76
CDH3P22223 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH3P22223 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms