Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHRM3P20309 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHRM3P20309 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CHRM3P20309 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.19■□□□□ 0.82
CHRM3P20309 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRM3P20309 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.19■□□□□ 0.82
CHRM3P20309 AC007322.4-201ENST00000509611 723 ntBASIC20.19■□□□□ 0.82
CHRM3P20309 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRM3P20309 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRM3P20309 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRM3P20309 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRM3P20309 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.18■□□□□ 0.82
CHRM3P20309 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.18■□□□□ 0.82
CHRM3P20309 FAM21FP-204ENST00000608637 956 ntBASIC20.18■□□□□ 0.82
CHRM3P20309 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.18■□□□□ 0.82
CHRM3P20309 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.18■□□□□ 0.82
CHRM3P20309 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRM3P20309 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
CHRM3P20309 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRM3P20309 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRM3P20309 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRM3P20309 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CHRM3P20309 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRM3P20309 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.17■□□□□ 0.82
CHRM3P20309 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHRM3P20309 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRM3P20309 AC092720.2-201ENST00000602388 1665 ntBASIC20.17■□□□□ 0.82
CHRM3P20309 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRM3P20309 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRM3P20309 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRM3P20309 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRM3P20309 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRM3P20309 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CHRM3P20309 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRM3P20309 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRM3P20309 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRM3P20309 AL162412.1-201ENST00000567129 965 ntBASIC20.16■□□□□ 0.82
CHRM3P20309 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRM3P20309 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 AC016405.3-201ENST00000607710 860 ntBASIC20.16■□□□□ 0.82
CHRM3P20309 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHRM3P20309 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRM3P20309 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRM3P20309 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRM3P20309 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRM3P20309 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
CHRM3P20309 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHRM3P20309 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CHRM3P20309 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 CNN2P6-201ENST00000439038 900 ntBASIC20.15■□□□□ 0.82
CHRM3P20309 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.15■□□□□ 0.82
CHRM3P20309 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CHRM3P20309 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
CHRM3P20309 AIRN-201ENST00000601203 4374 ntBASIC20.15■□□□□ 0.82
CHRM3P20309 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRM3P20309 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms