Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRAFP15056 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
BRAFP15056 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
BRAFP15056 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.83■□□□□ 0.93
BRAFP15056 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.83■□□□□ 0.93
BRAFP15056 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.83■□□□□ 0.93
BRAFP15056 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.83■□□□□ 0.93
BRAFP15056 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRAFP15056 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.83■□□□□ 0.92
BRAFP15056 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRAFP15056 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
BRAFP15056 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRAFP15056 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.83■□□□□ 0.92
BRAFP15056 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.82■□□□□ 0.92
BRAFP15056 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
BRAFP15056 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.82■□□□□ 0.92
BRAFP15056 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRAFP15056 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRAFP15056 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BRAFP15056 AC006015.1-201ENST00000429970 570 ntBASIC20.82■□□□□ 0.92
BRAFP15056 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BRAFP15056 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.82■□□□□ 0.92
BRAFP15056 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.82■□□□□ 0.92
BRAFP15056 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRAFP15056 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BRAFP15056 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
BRAFP15056 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BRAFP15056 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.81■□□□□ 0.92
BRAFP15056 AC004911.1-201ENST00000416316 871 ntBASIC20.81■□□□□ 0.92
BRAFP15056 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 AC137761.2-201ENST00000561729 223 ntBASIC20.81■□□□□ 0.92
BRAFP15056 AC145350.3-201ENST00000569033 163 ntBASIC20.81■□□□□ 0.92
BRAFP15056 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
BRAFP15056 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.81■□□□□ 0.92
BRAFP15056 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BRAFP15056 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
BRAFP15056 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
BRAFP15056 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.8■□□□□ 0.92
BRAFP15056 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.8■□□□□ 0.92
BRAFP15056 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
BRAFP15056 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
BRAFP15056 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BRAFP15056 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
BRAFP15056 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BRAFP15056 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BRAFP15056 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
BRAFP15056 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.79■□□□□ 0.92
BRAFP15056 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.79■□□□□ 0.92
BRAFP15056 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.79■□□□□ 0.92
BRAFP15056 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.79■□□□□ 0.92
BRAFP15056 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BRAFP15056 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.79■□□□□ 0.92
BRAFP15056 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRAFP15056 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
BRAFP15056 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRAFP15056 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.78■□□□□ 0.92
BRAFP15056 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms