Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP2P08253 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP2P08253 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP2P08253 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.52■□□□□ 0.88
MMP2P08253 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP2P08253 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.52■□□□□ 0.88
MMP2P08253 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MMP2P08253 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP2P08253 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP2P08253 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MMP2P08253 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MMP2P08253 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MMP2P08253 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.52■□□□□ 0.87
MMP2P08253 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MMP2P08253 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP2P08253 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP2P08253 MIPEPP3-201ENST00000412105 444 ntBASIC20.51■□□□□ 0.87
MMP2P08253 BX276092.2-201ENST00000417668 665 ntBASIC20.51■□□□□ 0.87
MMP2P08253 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP2P08253 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP2P08253 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP2P08253 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP2P08253 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.5■□□□□ 0.87
MMP2P08253 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.5■□□□□ 0.87
MMP2P08253 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP2P08253 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 AL589743.5-201ENST00000616611 1050 ntBASIC20.5■□□□□ 0.87
MMP2P08253 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP2P08253 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MMP2P08253 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.49■□□□□ 0.87
MMP2P08253 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP2P08253 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.49■□□□□ 0.87
MMP2P08253 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP2P08253 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
MMP2P08253 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
MMP2P08253 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP2P08253 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.49■□□□□ 0.87
MMP2P08253 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MMP2P08253 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP2P08253 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP2P08253 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.48■□□□□ 0.87
MMP2P08253 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP2P08253 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP2P08253 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP2P08253 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP2P08253 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP2P08253 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MMP2P08253 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP2P08253 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MMP2P08253 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP2P08253 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MMP2P08253 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
MMP2P08253 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP2P08253 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP2P08253 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP2P08253 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
MMP2P08253 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.47■□□□□ 0.87
MMP2P08253 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP2P08253 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MMP2P08253 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
MMP2P08253 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.47■□□□□ 0.87
MMP2P08253 AC104771.1-201ENST00000603335 964 ntBASIC20.47■□□□□ 0.87
MMP2P08253 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
MMP2P08253 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
MMP2P08253 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP2P08253 DPP3P2-201ENST00000416030 1696 ntBASIC20.47■□□□□ 0.87
MMP2P08253 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MMP2P08253 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP2P08253 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP2P08253 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP2P08253 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP2P08253 LSM12P1-201ENST00000411836 588 ntBASIC20.46■□□□□ 0.87
MMP2P08253 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms