Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGN2P05204 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN2P05204 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGN2P05204 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGN2P05204 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HMGN2P05204 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGN2P05204 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGN2P05204 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN2P05204 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 CNN2P6-201ENST00000439038 900 ntBASIC18.98■□□□□ 0.63
HMGN2P05204 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN2P05204 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN2P05204 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.98■□□□□ 0.63
HMGN2P05204 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGN2P05204 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGN2P05204 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGN2P05204 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGN2P05204 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGN2P05204 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGN2P05204 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGN2P05204 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGN2P05204 AC112907.3-201ENST00000577781 2400 ntBASIC18.97■□□□□ 0.63
HMGN2P05204 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGN2P05204 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
HMGN2P05204 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGN2P05204 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGN2P05204 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HMGN2P05204 SMG8-203ENST00000578922 2178 ntBASIC18.96■□□□□ 0.63
HMGN2P05204 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGN2P05204 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 AC099778.1-201ENST00000568593 1911 ntBASIC18.96■□□□□ 0.63
HMGN2P05204 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGN2P05204 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGN2P05204 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGN2P05204 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGN2P05204 BID-214ENST00000617586 542 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGN2P05204 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HMGN2P05204 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGN2P05204 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGN2P05204 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGN2P05204 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGN2P05204 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HMGN2P05204 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMGN2P05204 AC068338.2-201ENST00000563278 1430 ntBASIC18.95■□□□□ 0.62
HMGN2P05204 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 PGM5P4-201ENST00000421970 445 ntBASIC18.95■□□□□ 0.62
HMGN2P05204 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGN2P05204 AC022517.1-201ENST00000592429 346 ntBASIC18.95■□□□□ 0.62
HMGN2P05204 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGN2P05204 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGN2P05204 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGN2P05204 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGN2P05204 CYP21A1P-202ENST00000354927 1481 ntBASIC18.95■□□□□ 0.62
HMGN2P05204 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms