Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGN1P05114 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGN1P05114 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGN1P05114 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGN1P05114 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGN1P05114 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGN1P05114 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGN1P05114 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGN1P05114 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMGN1P05114 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMGN1P05114 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGN1P05114 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGN1P05114 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGN1P05114 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 AL136967.2-201ENST00000623968 743 ntBASIC18.36■□□□□ 0.53
HMGN1P05114 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGN1P05114 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMGN1P05114 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGN1P05114 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGN1P05114 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGN1P05114 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGN1P05114 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGN1P05114 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGN1P05114 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGN1P05114 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGN1P05114 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGN1P05114 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGN1P05114 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGN1P05114 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGN1P05114 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGN1P05114 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGN1P05114 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGN1P05114 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGN1P05114 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGN1P05114 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGN1P05114 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGN1P05114 SMG8-203ENST00000578922 2178 ntBASIC18.33■□□□□ 0.52
HMGN1P05114 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGN1P05114 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGN1P05114 AC010141.2-201ENST00000452426 721 ntBASIC18.33■□□□□ 0.52
HMGN1P05114 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGN1P05114 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGN1P05114 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGN1P05114 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
HMGN1P05114 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HMGN1P05114 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGN1P05114 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGN1P05114 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGN1P05114 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGN1P05114 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms