Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PDGFAP04085 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 REXO1L12P-201ENST00000622156 912 ntBASIC18.96■□□□□ 0.63
PDGFAP04085 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.95■□□□□ 0.62
PDGFAP04085 AC080038.3-201ENST00000623346 1952 ntBASIC18.95■□□□□ 0.62
PDGFAP04085 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.95■□□□□ 0.62
PDGFAP04085 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 POM121L13P-201ENST00000422362 380 ntBASIC18.95■□□□□ 0.62
PDGFAP04085 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDGFAP04085 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.95■□□□□ 0.62
PDGFAP04085 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDGFAP04085 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFAP04085 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFAP04085 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PDGFAP04085 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFAP04085 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.94■□□□□ 0.62
PDGFAP04085 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 MIR1224-201ENST00000408193 85 ntBASIC18.94■□□□□ 0.62
PDGFAP04085 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 FAM210CP-201ENST00000445714 574 ntBASIC18.94■□□□□ 0.62
PDGFAP04085 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.94■□□□□ 0.62
PDGFAP04085 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PDGFAP04085 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFAP04085 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PDGFAP04085 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.94■□□□□ 0.62
PDGFAP04085 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFAP04085 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFAP04085 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFAP04085 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDGFAP04085 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFAP04085 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.93■□□□□ 0.62
PDGFAP04085 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFAP04085 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFAP04085 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFAP04085 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFAP04085 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PDGFAP04085 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDGFAP04085 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.92■□□□□ 0.62
PDGFAP04085 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDGFAP04085 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.92■□□□□ 0.62
PDGFAP04085 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PDGFAP04085 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.92■□□□□ 0.62
PDGFAP04085 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms