Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
MT-ND1P03886 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.12■□□□□ 0.65
MT-ND1P03886 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MT-ND1P03886 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
MT-ND1P03886 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 AC005224.4-201ENST00000583262 1652 ntBASIC19.12■□□□□ 0.65
MT-ND1P03886 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.12■□□□□ 0.65
MT-ND1P03886 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.12■□□□□ 0.65
MT-ND1P03886 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.12■□□□□ 0.65
MT-ND1P03886 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MT-ND1P03886 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MT-ND1P03886 MIR572-201ENST00000384983 95 ntBASIC19.12■□□□□ 0.65
MT-ND1P03886 MIR939-201ENST00000401314 82 ntBASIC19.12■□□□□ 0.65
MT-ND1P03886 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.12■□□□□ 0.65
MT-ND1P03886 AC091305.1-201ENST00000479476 895 ntBASIC19.12■□□□□ 0.65
MT-ND1P03886 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.12■□□□□ 0.65
MT-ND1P03886 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.12■□□□□ 0.65
MT-ND1P03886 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.12■□□□□ 0.65
MT-ND1P03886 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.12■□□□□ 0.65
MT-ND1P03886 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-ND1P03886 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.12■□□□□ 0.65
MT-ND1P03886 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND1P03886 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 AC061975.6-201ENST00000579045 1553 ntBASIC19.11■□□□□ 0.65
MT-ND1P03886 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.11■□□□□ 0.65
MT-ND1P03886 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.11■□□□□ 0.65
MT-ND1P03886 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 AF213884.3-201ENST00000563833 479 ntBASIC19.11■□□□□ 0.65
MT-ND1P03886 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.11■□□□□ 0.65
MT-ND1P03886 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.11■□□□□ 0.65
MT-ND1P03886 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
MT-ND1P03886 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-ND1P03886 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND1P03886 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
MT-ND1P03886 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.1■□□□□ 0.65
MT-ND1P03886 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MT-ND1P03886 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
MT-ND1P03886 AP000974.1-201ENST00000623909 2387 ntBASIC19.1■□□□□ 0.65
MT-ND1P03886 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-ND1P03886 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND1P03886 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND1P03886 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.09■□□□□ 0.65
MT-ND1P03886 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
MT-ND1P03886 AL031432.3-201ENST00000607698 485 ntBASIC19.09■□□□□ 0.65
MT-ND1P03886 AL136967.2-201ENST00000623968 743 ntBASIC19.09■□□□□ 0.65
MT-ND1P03886 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-ND1P03886 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MT-ND1P03886 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MT-ND1P03886 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MT-ND1P03886 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MT-ND1P03886 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
MT-ND1P03886 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms