Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.56■■□□□ 1.2
CD4P01730 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
CD4P01730 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
CD4P01730 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CD4P01730 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.55■■□□□ 1.2
CD4P01730 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.55■■□□□ 1.2
CD4P01730 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 PGM5P4-201ENST00000421970 445 ntBASIC22.55■■□□□ 1.2
CD4P01730 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CD4P01730 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.55■■□□□ 1.2
CD4P01730 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.55■■□□□ 1.2
CD4P01730 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.55■■□□□ 1.2
CD4P01730 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD4P01730 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CD4P01730 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CD4P01730 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CD4P01730 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CD4P01730 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.54■■□□□ 1.2
CD4P01730 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.54■■□□□ 1.2
CD4P01730 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CD4P01730 AL353708.3-201ENST00000610272 989 ntBASIC22.54■■□□□ 1.2
CD4P01730 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD4P01730 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CD4P01730 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
CD4P01730 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.54■■□□□ 1.2
CD4P01730 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CD4P01730 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CD4P01730 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CD4P01730 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD4P01730 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.53■■□□□ 1.2
CD4P01730 AL390719.1-204ENST00000412397 1219 ntBASIC22.53■■□□□ 1.2
CD4P01730 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CD4P01730 AL356652.1-201ENST00000615962 565 ntBASIC22.53■■□□□ 1.2
CD4P01730 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.53■■□□□ 1.2
CD4P01730 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD4P01730 EP400NL-214ENST00000641289 2402 ntBASIC22.53■■□□□ 1.2
CD4P01730 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CD4P01730 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.52■■□□□ 1.2
CD4P01730 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
CD4P01730 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.52■■□□□ 1.2
CD4P01730 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.52■■□□□ 1.2
CD4P01730 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD4P01730 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CD4P01730 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.52■■□□□ 1.2
CD4P01730 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.51■■□□□ 1.19
CD4P01730 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD4P01730 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
CD4P01730 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.5■■□□□ 1.19
CD4P01730 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
CD4P01730 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.5■■□□□ 1.19
CD4P01730 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.5■■□□□ 1.19
CD4P01730 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CD4P01730 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD4P01730 AC026471.5-201ENST00000615068 467 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms