Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOP3BO95985 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TOP3BO95985 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 AC055733.4-201ENST00000638462 1354 ntBASIC20.75■□□□□ 0.91
TOP3BO95985 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TOP3BO95985 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.75■□□□□ 0.91
TOP3BO95985 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TOP3BO95985 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.75■□□□□ 0.91
TOP3BO95985 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.75■□□□□ 0.91
TOP3BO95985 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.75■□□□□ 0.91
TOP3BO95985 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.75■□□□□ 0.91
TOP3BO95985 AC010331.1-201ENST00000611423 582 ntBASIC20.75■□□□□ 0.91
TOP3BO95985 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TOP3BO95985 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TOP3BO95985 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TOP3BO95985 AC027702.1-201ENST00000563810 1770 ntBASIC20.74■□□□□ 0.91
TOP3BO95985 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.74■□□□□ 0.91
TOP3BO95985 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.74■□□□□ 0.91
TOP3BO95985 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.74■□□□□ 0.91
TOP3BO95985 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TOP3BO95985 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 AC008550.1-201ENST00000511500 884 ntBASIC20.74■□□□□ 0.91
TOP3BO95985 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TOP3BO95985 GABARAPL3-202ENST00000624044 1851 ntBASIC20.74■□□□□ 0.91
TOP3BO95985 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
TOP3BO95985 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TOP3BO95985 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
TOP3BO95985 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TOP3BO95985 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TOP3BO95985 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.73■□□□□ 0.91
TOP3BO95985 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.73■□□□□ 0.91
TOP3BO95985 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
TOP3BO95985 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.73■□□□□ 0.91
TOP3BO95985 AFG3L1P-217ENST00000557444 2447 ntBASIC20.73■□□□□ 0.91
TOP3BO95985 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP3BO95985 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP3BO95985 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP3BO95985 BX276092.2-201ENST00000417668 665 ntBASIC20.72■□□□□ 0.91
TOP3BO95985 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP3BO95985 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 AC016405.3-201ENST00000607710 860 ntBASIC20.72■□□□□ 0.91
TOP3BO95985 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.72■□□□□ 0.91
TOP3BO95985 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms