Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 POU5F1P3-201ENST00000428824 1078 ntBASIC18.03■□□□□ 0.48
CNOT4O95628 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT4O95628 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.03■□□□□ 0.48
CNOT4O95628 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.03■□□□□ 0.48
CNOT4O95628 AC098934.4-201ENST00000564127 592 ntBASIC18.03■□□□□ 0.48
CNOT4O95628 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT4O95628 AC105020.6-201ENST00000621523 1217 ntBASIC18.03■□□□□ 0.48
CNOT4O95628 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT4O95628 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT4O95628 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT4O95628 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT4O95628 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CNOT4O95628 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.02■□□□□ 0.48
CNOT4O95628 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.02■□□□□ 0.48
CNOT4O95628 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT4O95628 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.02■□□□□ 0.48
CNOT4O95628 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.02■□□□□ 0.48
CNOT4O95628 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT4O95628 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT4O95628 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT4O95628 KRT17P1-201ENST00000399211 1546 ntBASIC18.02■□□□□ 0.47
CNOT4O95628 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT4O95628 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT4O95628 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT4O95628 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CNOT4O95628 AC121338.2-201ENST00000622535 1744 ntBASIC18.01■□□□□ 0.47
CNOT4O95628 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CNOT4O95628 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 AL355472.2-201ENST00000422958 438 ntBASIC18.01■□□□□ 0.47
CNOT4O95628 DUSP5P2-201ENST00000426873 1033 ntBASIC18.01■□□□□ 0.47
CNOT4O95628 RNA5SP413-201ENST00000516373 109 ntBASIC18.01■□□□□ 0.47
CNOT4O95628 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNOT4O95628 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 ITM2C-210ENST00000620962 501 ntBASIC18.01■□□□□ 0.47
CNOT4O95628 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT4O95628 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.01■□□□□ 0.47
CNOT4O95628 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT4O95628 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT4O95628 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT4O95628 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18■□□□□ 0.47
CNOT4O95628 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18■□□□□ 0.47
CNOT4O95628 AC027702.1-201ENST00000563810 1770 ntBASIC18■□□□□ 0.47
CNOT4O95628 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18■□□□□ 0.47
CNOT4O95628 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18■□□□□ 0.47
CNOT4O95628 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CNOT4O95628 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18■□□□□ 0.47
CNOT4O95628 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CNOT4O95628 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18■□□□□ 0.47
CNOT4O95628 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNOT4O95628 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CNOT4O95628 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.99■□□□□ 0.47
CNOT4O95628 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.99■□□□□ 0.47
CNOT4O95628 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 AL356652.1-201ENST00000615962 565 ntBASIC17.99■□□□□ 0.47
CNOT4O95628 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CNOT4O95628 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CNOT4O95628 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNOT4O95628 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CNOT4O95628 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms