Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RAPGEF3O95398 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
RAPGEF3O95398 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC30.8■■■□□ 2.52
RAPGEF3O95398 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
RAPGEF3O95398 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC30.8■■■□□ 2.52
RAPGEF3O95398 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.79■■■□□ 2.52
RAPGEF3O95398 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC30.79■■■□□ 2.52
RAPGEF3O95398 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RAPGEF3O95398 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.79■■■□□ 2.52
RAPGEF3O95398 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RAPGEF3O95398 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.79■■■□□ 2.52
RAPGEF3O95398 CR392000.1-201ENST00000624770 1228 ntBASIC30.79■■■□□ 2.52
RAPGEF3O95398 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
RAPGEF3O95398 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF3O95398 CRYGFP-201ENST00000418459 633 ntBASIC30.78■■■□□ 2.52
RAPGEF3O95398 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 KRT18P56-201ENST00000507275 550 ntBASIC30.78■■■□□ 2.52
RAPGEF3O95398 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF3O95398 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC30.78■■■□□ 2.52
RAPGEF3O95398 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF3O95398 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RAPGEF3O95398 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF3O95398 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.77■■■□□ 2.52
RAPGEF3O95398 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
RAPGEF3O95398 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF3O95398 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
RAPGEF3O95398 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.77■■■□□ 2.52
RAPGEF3O95398 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.77■■■□□ 2.52
RAPGEF3O95398 AC091076.1-201ENST00000610741 619 ntBASIC30.77■■■□□ 2.52
RAPGEF3O95398 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF3O95398 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF3O95398 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RAPGEF3O95398 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RAPGEF3O95398 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RAPGEF3O95398 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RAPGEF3O95398 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC30.76■■■□□ 2.51
RAPGEF3O95398 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.76■■■□□ 2.51
RAPGEF3O95398 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF3O95398 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.75■■■□□ 2.51
RAPGEF3O95398 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF3O95398 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF3O95398 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF3O95398 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.74■■■□□ 2.51
RAPGEF3O95398 AC080038.3-201ENST00000623346 1952 ntBASIC30.74■■■□□ 2.51
RAPGEF3O95398 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF3O95398 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
RAPGEF3O95398 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF3O95398 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF3O95398 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.73■■■□□ 2.51
RAPGEF3O95398 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.73■■■□□ 2.51
RAPGEF3O95398 AC022616.7-201ENST00000525383 220 ntBASIC30.73■■■□□ 2.51
RAPGEF3O95398 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.73■■■□□ 2.51
RAPGEF3O95398 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF3O95398 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF3O95398 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
RAPGEF3O95398 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF3O95398 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF3O95398 TREX2-204ENST00000370212 861 ntTSL 5 BASIC30.72■■■□□ 2.51
RAPGEF3O95398 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
RAPGEF3O95398 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
RAPGEF3O95398 ECEL1P2-202ENST00000465689 757 ntBASIC30.72■■■□□ 2.51
RAPGEF3O95398 AC004264.1-201ENST00000608354 794 ntBASIC30.72■■■□□ 2.51
RAPGEF3O95398 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC30.72■■■□□ 2.51
RAPGEF3O95398 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF3O95398 FAM99A-202ENST00000538190 1989 ntBASIC30.72■■■□□ 2.51
RAPGEF3O95398 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms