Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBL3O95164 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 PCDHAC2-203ENST00000615316 3011 ntBASIC18.18■□□□□ 0.5
UBL3O95164 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBL3O95164 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.18■□□□□ 0.5
UBL3O95164 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 AC010536.3-201ENST00000620306 533 ntBASIC18.18■□□□□ 0.5
UBL3O95164 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBL3O95164 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBL3O95164 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBL3O95164 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
UBL3O95164 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL3O95164 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBL3O95164 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.17■□□□□ 0.5
UBL3O95164 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.17■□□□□ 0.5
UBL3O95164 AC011767.1-201ENST00000617410 1153 ntBASIC18.17■□□□□ 0.5
UBL3O95164 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.17■□□□□ 0.5
UBL3O95164 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.17■□□□□ 0.5
UBL3O95164 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL3O95164 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.17■□□□□ 0.5
UBL3O95164 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBL3O95164 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 RBM17P2-201ENST00000616397 1405 ntBASIC18.16■□□□□ 0.5
UBL3O95164 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
UBL3O95164 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.16■□□□□ 0.5
UBL3O95164 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
UBL3O95164 MFSD11-216ENST00000590393 1141 ntBASIC18.16■□□□□ 0.5
UBL3O95164 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBL3O95164 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.16■□□□□ 0.5
UBL3O95164 IKBKGP1-201ENST00000612193 1073 ntBASIC18.16■□□□□ 0.5
UBL3O95164 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.16■□□□□ 0.5
UBL3O95164 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.16■□□□□ 0.5
UBL3O95164 RARRES2P11-201ENST00000635158 484 ntBASIC18.16■□□□□ 0.5
UBL3O95164 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UBL3O95164 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBL3O95164 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UBL3O95164 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL3O95164 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
UBL3O95164 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
UBL3O95164 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL3O95164 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBL3O95164 TERF1P5-201ENST00000477545 1207 ntBASIC18.15■□□□□ 0.5
UBL3O95164 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.15■□□□□ 0.5
UBL3O95164 AC092666.2-201ENST00000613287 246 ntBASIC18.15■□□□□ 0.5
UBL3O95164 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 AC092437.1-201ENST00000624794 1048 ntBASIC18.15■□□□□ 0.5
UBL3O95164 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UBL3O95164 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBL3O95164 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UBL3O95164 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBL3O95164 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBL3O95164 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
UBL3O95164 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBL3O95164 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBL3O95164 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms