Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC43A1O75387 AC011767.1-201ENST00000617410 1153 ntBASIC18.37■□□□□ 0.53
SLC43A1O75387 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC43A1O75387 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC43A1O75387 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC43A1O75387 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC43A1O75387 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC43A1O75387 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC43A1O75387 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 TERF1P5-201ENST00000477545 1207 ntBASIC18.36■□□□□ 0.53
SLC43A1O75387 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC43A1O75387 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC43A1O75387 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 MFSD11-216ENST00000590393 1141 ntBASIC18.36■□□□□ 0.53
SLC43A1O75387 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC43A1O75387 AL137784.2-201ENST00000607332 1000 ntBASIC18.36■□□□□ 0.53
SLC43A1O75387 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC43A1O75387 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC43A1O75387 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC43A1O75387 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
SLC43A1O75387 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 AP005212.1-201ENST00000581547 1997 ntBASIC18.35■□□□□ 0.53
SLC43A1O75387 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SLC43A1O75387 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC43A1O75387 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC43A1O75387 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC43A1O75387 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC43A1O75387 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.34■□□□□ 0.53
SLC43A1O75387 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC43A1O75387 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC43A1O75387 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
SLC43A1O75387 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC43A1O75387 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.34■□□□□ 0.53
SLC43A1O75387 IKBKGP1-201ENST00000612193 1073 ntBASIC18.34■□□□□ 0.53
SLC43A1O75387 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.34■□□□□ 0.53
SLC43A1O75387 AC013268.1-206ENST00000638368 961 ntBASIC18.34■□□□□ 0.53
SLC43A1O75387 AC112229.1-201ENST00000639295 961 ntBASIC18.34■□□□□ 0.53
SLC43A1O75387 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC43A1O75387 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
SLC43A1O75387 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SLC43A1O75387 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC43A1O75387 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC43A1O75387 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC43A1O75387 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC43A1O75387 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC43A1O75387 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC43A1O75387 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SLC43A1O75387 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC43A1O75387 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC43A1O75387 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC43A1O75387 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC43A1O75387 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SLC43A1O75387 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms