Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB3O75112 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB3O75112 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LDB3O75112 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB3O75112 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB3O75112 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.13■□□□□ 0.65
LDB3O75112 FEM1AP1-201ENST00000431297 1995 ntBASIC19.13■□□□□ 0.65
LDB3O75112 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB3O75112 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB3O75112 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LDB3O75112 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LDB3O75112 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LDB3O75112 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.12■□□□□ 0.65
LDB3O75112 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 LSM12P1-201ENST00000411836 588 ntBASIC19.12■□□□□ 0.65
LDB3O75112 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB3O75112 AC105020.6-201ENST00000621523 1217 ntBASIC19.12■□□□□ 0.65
LDB3O75112 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.12■□□□□ 0.65
LDB3O75112 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB3O75112 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LDB3O75112 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LDB3O75112 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LDB3O75112 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LDB3O75112 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB3O75112 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB3O75112 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB3O75112 AL138781.1-201ENST00000566567 1274 ntBASIC19.11■□□□□ 0.65
LDB3O75112 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 AL589743.5-201ENST00000616611 1050 ntBASIC19.11■□□□□ 0.65
LDB3O75112 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.11■□□□□ 0.65
LDB3O75112 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB3O75112 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LDB3O75112 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB3O75112 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB3O75112 AC092667.1-201ENST00000434301 2586 ntBASIC19.1■□□□□ 0.65
LDB3O75112 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.1■□□□□ 0.65
LDB3O75112 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB3O75112 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.1■□□□□ 0.65
LDB3O75112 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB3O75112 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LDB3O75112 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 AL355802.2-201ENST00000402069 882 ntBASIC19.1■□□□□ 0.65
LDB3O75112 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LDB3O75112 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LDB3O75112 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB3O75112 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB3O75112 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB3O75112 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB3O75112 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB3O75112 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.09■□□□□ 0.65
LDB3O75112 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LDB3O75112 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
LDB3O75112 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LDB3O75112 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LDB3O75112 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.09■□□□□ 0.65
LDB3O75112 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB3O75112 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms