Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCN2BO60939 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCN2BO60939 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 SMG8-203ENST00000578922 2178 ntBASIC19.25■□□□□ 0.67
SCN2BO60939 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN2BO60939 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN2BO60939 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN2BO60939 KRT8P36-201ENST00000489121 1440 ntBASIC19.25■□□□□ 0.67
SCN2BO60939 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SCN2BO60939 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCN2BO60939 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCN2BO60939 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN2BO60939 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN2BO60939 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN2BO60939 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCN2BO60939 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
SCN2BO60939 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN2BO60939 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCN2BO60939 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN2BO60939 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SCN2BO60939 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SCN2BO60939 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN2BO60939 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.23■□□□□ 0.67
SCN2BO60939 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN2BO60939 AC007322.3-201ENST00000426526 701 ntBASIC19.23■□□□□ 0.67
SCN2BO60939 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN2BO60939 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCN2BO60939 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN2BO60939 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCN2BO60939 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.22■□□□□ 0.67
SCN2BO60939 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SCN2BO60939 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN2BO60939 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN2BO60939 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN2BO60939 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.22■□□□□ 0.67
SCN2BO60939 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCN2BO60939 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN2BO60939 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN2BO60939 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN2BO60939 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCN2BO60939 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCN2BO60939 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SCN2BO60939 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN2BO60939 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN2BO60939 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms