Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 DUSP5P2-201ENST00000426873 1033 ntBASIC19.06■□□□□ 0.64
CTNSO60931 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNSO60931 AC069152.1-201ENST00000438030 544 ntBASIC19.06■□□□□ 0.64
CTNSO60931 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNSO60931 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNSO60931 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CTNSO60931 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNSO60931 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTNSO60931 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNSO60931 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNSO60931 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTNSO60931 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.05■□□□□ 0.64
CTNSO60931 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNSO60931 AC097658.1-201ENST00000475555 843 ntBASIC19.05■□□□□ 0.64
CTNSO60931 AC091874.3-201ENST00000512672 1195 ntBASIC19.05■□□□□ 0.64
CTNSO60931 C2orf69P4-201ENST00000565394 541 ntBASIC19.05■□□□□ 0.64
CTNSO60931 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNSO60931 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNSO60931 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTNSO60931 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNSO60931 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNSO60931 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNSO60931 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTNSO60931 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.04■□□□□ 0.64
CTNSO60931 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNSO60931 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.04■□□□□ 0.64
CTNSO60931 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNSO60931 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNSO60931 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.03■□□□□ 0.64
CTNSO60931 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNSO60931 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNSO60931 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNSO60931 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.03■□□□□ 0.64
CTNSO60931 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 MYC-209ENST00000641252 345 ntBASIC19.03■□□□□ 0.64
CTNSO60931 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNSO60931 SLC25A24-204ENST00000569674 2357 ntBASIC19.03■□□□□ 0.64
CTNSO60931 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNSO60931 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNSO60931 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.02■□□□□ 0.64
CTNSO60931 AC092720.2-201ENST00000602388 1665 ntBASIC19.02■□□□□ 0.64
CTNSO60931 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNSO60931 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTNSO60931 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNSO60931 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.02■□□□□ 0.64
CTNSO60931 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTNSO60931 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.02■□□□□ 0.64
CTNSO60931 AC098934.4-201ENST00000564127 592 ntBASIC19.02■□□□□ 0.64
CTNSO60931 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNSO60931 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.02■□□□□ 0.63
CTNSO60931 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CTNSO60931 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms