Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.93■□□□□ 0.62
HCN1O60741 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.93■□□□□ 0.62
HCN1O60741 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HCN1O60741 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HCN1O60741 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.93■□□□□ 0.62
HCN1O60741 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HCN1O60741 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.93■□□□□ 0.62
HCN1O60741 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
HCN1O60741 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.93■□□□□ 0.62
HCN1O60741 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HCN1O60741 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HCN1O60741 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCN1O60741 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HCN1O60741 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HCN1O60741 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HCN1O60741 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HCN1O60741 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.92■□□□□ 0.62
HCN1O60741 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.92■□□□□ 0.62
HCN1O60741 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HCN1O60741 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HCN1O60741 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.92■□□□□ 0.62
HCN1O60741 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.92■□□□□ 0.62
HCN1O60741 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.92■□□□□ 0.62
HCN1O60741 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.92■□□□□ 0.62
HCN1O60741 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HCN1O60741 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCN1O60741 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.91■□□□□ 0.62
HCN1O60741 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.91■□□□□ 0.62
HCN1O60741 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HCN1O60741 AL512625.2-201ENST00000417533 625 ntBASIC18.91■□□□□ 0.62
HCN1O60741 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.91■□□□□ 0.62
HCN1O60741 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.91■□□□□ 0.62
HCN1O60741 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.91■□□□□ 0.62
HCN1O60741 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 AL591742.1-201ENST00000604433 565 ntBASIC18.91■□□□□ 0.62
HCN1O60741 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.91■□□□□ 0.62
HCN1O60741 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HCN1O60741 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.91■□□□□ 0.62
HCN1O60741 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HCN1O60741 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HCN1O60741 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.91■□□□□ 0.62
HCN1O60741 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HCN1O60741 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
HCN1O60741 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HCN1O60741 LINC01006-201ENST00000333319 2292 ntBASIC18.9■□□□□ 0.62
HCN1O60741 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.9■□□□□ 0.62
HCN1O60741 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 AC073210.2-201ENST00000430369 194 ntBASIC18.9■□□□□ 0.62
HCN1O60741 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.9■□□□□ 0.62
HCN1O60741 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.9■□□□□ 0.62
HCN1O60741 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.9■□□□□ 0.62
HCN1O60741 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HCN1O60741 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.9■□□□□ 0.62
HCN1O60741 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
HCN1O60741 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HCN1O60741 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HCN1O60741 PLK5-205ENST00000642079 1969 ntBASIC18.9■□□□□ 0.62
HCN1O60741 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HCN1O60741 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms