Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.65■□□□□ 0.9
KDELR3O43731 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KDELR3O43731 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDELR3O43731 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KDELR3O43731 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.9
KDELR3O43731 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.64■□□□□ 0.9
KDELR3O43731 PKD1P6-201ENST00000343738 4769 ntBASIC20.64■□□□□ 0.9
KDELR3O43731 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDELR3O43731 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
KDELR3O43731 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDELR3O43731 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.64■□□□□ 0.89
KDELR3O43731 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KDELR3O43731 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.64■□□□□ 0.89
KDELR3O43731 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.64■□□□□ 0.89
KDELR3O43731 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.64■□□□□ 0.89
KDELR3O43731 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDELR3O43731 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDELR3O43731 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDELR3O43731 AC092720.2-201ENST00000602388 1665 ntBASIC20.64■□□□□ 0.89
KDELR3O43731 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.64■□□□□ 0.89
KDELR3O43731 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KDELR3O43731 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KDELR3O43731 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.63■□□□□ 0.89
KDELR3O43731 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.63■□□□□ 0.89
KDELR3O43731 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
KDELR3O43731 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.63■□□□□ 0.89
KDELR3O43731 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.63■□□□□ 0.89
KDELR3O43731 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.63■□□□□ 0.89
KDELR3O43731 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDELR3O43731 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.62■□□□□ 0.89
KDELR3O43731 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.62■□□□□ 0.89
KDELR3O43731 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.62■□□□□ 0.89
KDELR3O43731 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.62■□□□□ 0.89
KDELR3O43731 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.62■□□□□ 0.89
KDELR3O43731 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.62■□□□□ 0.89
KDELR3O43731 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.62■□□□□ 0.89
KDELR3O43731 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KDELR3O43731 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDELR3O43731 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KDELR3O43731 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KDELR3O43731 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.61■□□□□ 0.89
KDELR3O43731 HLA-B-256ENST00000639848 1089 ntBASIC20.61■□□□□ 0.89
KDELR3O43731 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
KDELR3O43731 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KDELR3O43731 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDELR3O43731 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDELR3O43731 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KDELR3O43731 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDELR3O43731 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDELR3O43731 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KDELR3O43731 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.6■□□□□ 0.89
KDELR3O43731 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
KDELR3O43731 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.59■□□□□ 0.89
KDELR3O43731 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.59■□□□□ 0.89
KDELR3O43731 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDELR3O43731 AC060766.5-201ENST00000590539 871 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms