Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RRP8O43159 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.16■□□□□ 0.66
RRP8O43159 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RRP8O43159 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.16■□□□□ 0.66
RRP8O43159 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.16■□□□□ 0.66
RRP8O43159 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RRP8O43159 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RRP8O43159 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RRP8O43159 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RRP8O43159 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RRP8O43159 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.15■□□□□ 0.66
RRP8O43159 FAM197Y1-201ENST00000421178 764 ntBASIC19.15■□□□□ 0.66
RRP8O43159 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.15■□□□□ 0.66
RRP8O43159 KRT16P5-201ENST00000455284 522 ntBASIC19.15■□□□□ 0.66
RRP8O43159 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.15■□□□□ 0.66
RRP8O43159 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.15■□□□□ 0.66
RRP8O43159 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.15■□□□□ 0.66
RRP8O43159 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.15■□□□□ 0.66
RRP8O43159 AC087388.1-201ENST00000571370 1112 ntBASIC19.15■□□□□ 0.66
RRP8O43159 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RRP8O43159 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RRP8O43159 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 KRT18P22-201ENST00000402024 1347 ntBASIC19.15■□□□□ 0.66
RRP8O43159 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 AC087633.2-202ENST00000565166 1439 ntBASIC19.15■□□□□ 0.66
RRP8O43159 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RRP8O43159 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RRP8O43159 AC087742.1-201ENST00000575880 1738 ntBASIC19.14■□□□□ 0.66
RRP8O43159 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RRP8O43159 KRT18P57-201ENST00000443599 1254 ntBASIC19.14■□□□□ 0.65
RRP8O43159 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RRP8O43159 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.14■□□□□ 0.65
RRP8O43159 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
RRP8O43159 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RRP8O43159 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RRP8O43159 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.14■□□□□ 0.65
RRP8O43159 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RRP8O43159 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.14■□□□□ 0.65
RRP8O43159 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.14■□□□□ 0.65
RRP8O43159 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
RRP8O43159 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RRP8O43159 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RRP8O43159 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RRP8O43159 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.13■□□□□ 0.65
RRP8O43159 NAPSB-206ENST00000562112 1266 ntBASIC19.13■□□□□ 0.65
RRP8O43159 AC073195.1-201ENST00000607241 877 ntBASIC19.13■□□□□ 0.65
RRP8O43159 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.13■□□□□ 0.65
RRP8O43159 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.13■□□□□ 0.65
RRP8O43159 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RRP8O43159 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RRP8O43159 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RRP8O43159 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RRP8O43159 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RRP8O43159 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.12■□□□□ 0.65
RRP8O43159 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RRP8O43159 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RRP8O43159 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.12■□□□□ 0.65
RRP8O43159 RBM17P1-201ENST00000453646 1190 ntBASIC19.12■□□□□ 0.65
RRP8O43159 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.12■□□□□ 0.65
RRP8O43159 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RRP8O43159 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.12■□□□□ 0.65
RRP8O43159 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RRP8O43159 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.12■□□□□ 0.65
RRP8O43159 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.12■□□□□ 0.65
RRP8O43159 AL031963.3-201ENST00000606441 850 ntBASIC19.12■□□□□ 0.65
RRP8O43159 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.12■□□□□ 0.65
RRP8O43159 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RRP8O43159 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.11■□□□□ 0.65
RRP8O43159 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.11■□□□□ 0.65
RRP8O43159 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms