Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
CLOCKO15516 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.22■□□□□ 0.67
CLOCKO15516 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
CLOCKO15516 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 TCF3P1-201ENST00000423021 1937 ntBASIC19.21■□□□□ 0.67
CLOCKO15516 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
CLOCKO15516 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLOCKO15516 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.21■□□□□ 0.67
CLOCKO15516 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.21■□□□□ 0.67
CLOCKO15516 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.21■□□□□ 0.67
CLOCKO15516 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLOCKO15516 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.21■□□□□ 0.67
CLOCKO15516 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLOCKO15516 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLOCKO15516 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.21■□□□□ 0.67
CLOCKO15516 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
CLOCKO15516 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.2■□□□□ 0.66
CLOCKO15516 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.2■□□□□ 0.66
CLOCKO15516 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.2■□□□□ 0.66
CLOCKO15516 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.2■□□□□ 0.66
CLOCKO15516 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.2■□□□□ 0.66
CLOCKO15516 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
CLOCKO15516 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLOCKO15516 BX005040.4-201ENST00000637145 1518 ntBASIC19.2■□□□□ 0.66
CLOCKO15516 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
CLOCKO15516 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
CLOCKO15516 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.19■□□□□ 0.66
CLOCKO15516 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLOCKO15516 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.19■□□□□ 0.66
CLOCKO15516 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.19■□□□□ 0.66
CLOCKO15516 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.19■□□□□ 0.66
CLOCKO15516 IGHV3-19-201ENST00000521488 291 ntBASIC19.19■□□□□ 0.66
CLOCKO15516 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.19■□□□□ 0.66
CLOCKO15516 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.19■□□□□ 0.66
CLOCKO15516 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
CLOCKO15516 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLOCKO15516 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLOCKO15516 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLOCKO15516 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
CLOCKO15516 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLOCKO15516 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.18■□□□□ 0.66
CLOCKO15516 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLOCKO15516 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLOCKO15516 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.18■□□□□ 0.66
CLOCKO15516 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
CLOCKO15516 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLOCKO15516 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLOCKO15516 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLOCKO15516 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLOCKO15516 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLOCKO15516 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLOCKO15516 AL162430.1-201ENST00000480705 870 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms