Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COPEO14579 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.29■□□□□ 0.84
COPEO14579 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.28■□□□□ 0.84
COPEO14579 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COPEO14579 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
COPEO14579 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.28■□□□□ 0.84
COPEO14579 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
COPEO14579 AC012414.1-201ENST00000556676 535 ntBASIC20.28■□□□□ 0.84
COPEO14579 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.28■□□□□ 0.84
COPEO14579 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPEO14579 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COPEO14579 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.27■□□□□ 0.84
COPEO14579 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 PBX2P1-201ENST00000493219 1291 ntBASIC20.27■□□□□ 0.84
COPEO14579 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.27■□□□□ 0.84
COPEO14579 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPEO14579 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COPEO14579 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPEO14579 AC125437.2-201ENST00000625180 2167 ntBASIC20.27■□□□□ 0.83
COPEO14579 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.26■□□□□ 0.83
COPEO14579 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
COPEO14579 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.26■□□□□ 0.83
COPEO14579 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.26■□□□□ 0.83
COPEO14579 AP001330.3-201ENST00000520123 633 ntBASIC20.26■□□□□ 0.83
COPEO14579 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.26■□□□□ 0.83
COPEO14579 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COPEO14579 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.26■□□□□ 0.83
COPEO14579 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.26■□□□□ 0.83
COPEO14579 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 KRT16P2-201ENST00000414673 1423 ntBASIC20.26■□□□□ 0.83
COPEO14579 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COPEO14579 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPEO14579 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COPEO14579 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 RASA4CP-201ENST00000424092 1398 ntBASIC20.25■□□□□ 0.83
COPEO14579 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.25■□□□□ 0.83
COPEO14579 TPRG1LP1-201ENST00000598702 760 ntBASIC20.25■□□□□ 0.83
COPEO14579 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.25■□□□□ 0.83
COPEO14579 AL158211.5-201ENST00000623583 2518 ntBASIC20.25■□□□□ 0.83
COPEO14579 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.25■□□□□ 0.83
COPEO14579 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPEO14579 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.25■□□□□ 0.83
COPEO14579 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COPEO14579 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
COPEO14579 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COPEO14579 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COPEO14579 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COPEO14579 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
COPEO14579 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPEO14579 AC116050.2-201ENST00000612102 1779 ntBASIC20.24■□□□□ 0.83
COPEO14579 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPEO14579 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPEO14579 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.24■□□□□ 0.83
COPEO14579 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPEO14579 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.24■□□□□ 0.83
COPEO14579 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.24■□□□□ 0.83
COPEO14579 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPEO14579 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms