Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 VOA1YGR106C 798 nt2.09□□□□□ -2.07
TY1B-AO13527 tT(UGU)Q1tT(UGU)Q1 76 nt2.09□□□□□ -2.07
TY1B-AO13527 NCE101YJL205C 162 nt2.09□□□□□ -2.07
TY1B-AO13527 YJR079WYJR079W 330 nt2.09□□□□□ -2.07
TY1B-AO13527 MRPL44YMR225C 297 nt2.09□□□□□ -2.07
TY1B-AO13527 GAL7YBR018C 1101 nt2.09□□□□□ -2.07
TY1B-AO13527 AGC1YPR021C 2709 nt2.09□□□□□ -2.08
TY1B-AO13527 SOK2YMR016C 2358 nt2.08□□□□□ -2.08
TY1B-AO13527 RPC10YHR143W-A 213 nt2.08□□□□□ -2.08
TY1B-AO13527 YLR031WYLR031W 561 nt2.08□□□□□ -2.08
TY1B-AO13527 ATP19YOL077W-A 207 nt2.08□□□□□ -2.08
TY1B-AO13527 SFB2YNL049C 2631 nt2.08□□□□□ -2.08
TY1B-AO13527 MNE1YOR350C 1992 nt2.07□□□□□ -2.08
TY1B-AO13527 SMD1YGR074W 441 nt2.07□□□□□ -2.08
TY1B-AO13527 NOP10YHR072W-A 177 nt2.07□□□□□ -2.08
TY1B-AO13527 tT(UGU)HtT(UGU)H 72 nt2.07□□□□□ -2.08
TY1B-AO13527 SNC1YAL030W 354 nt2.07□□□□□ -2.08
TY1B-AO13527 YOR333CYOR333C 417 nt2.07□□□□□ -2.08
TY1B-AO13527 YOR392WYOR392W 444 nt2.07□□□□□ -2.08
TY1B-AO13527 PET309YLR067C 2898 nt2.07□□□□□ -2.08
TY1B-AO13527 BFA1YJR053W 1725 nt2.06□□□□□ -2.08
TY1B-AO13527 RPI1YIL119C 1224 nt2.06□□□□□ -2.08
TY1B-AO13527 IRC19YLL033W 693 nt2.06□□□□□ -2.08
TY1B-AO13527 FYV7YLR068W 456 nt2.06□□□□□ -2.08
TY1B-AO13527 PET123YOR158W 957 nt2.06□□□□□ -2.08
TY1B-AO13527 CRM1YGR218W 3255 nt2.06□□□□□ -2.08
TY1B-AO13527 RNH70YGR276C 1662 nt2.06□□□□□ -2.08
TY1B-AO13527 SPC72YAL047C 1869 nt2.05□□□□□ -2.08
TY1B-AO13527 NUP192YJL039C 5052 nt2.05□□□□□ -2.08
TY1B-AO13527 NUP120YKL057C 3114 nt2.05□□□□□ -2.08
TY1B-AO13527 YOR093CYOR093C 4947 nt2.05□□□□□ -2.08
TY1B-AO13527 RPL37BYDR500C 267 nt2.05□□□□□ -2.08
TY1B-AO13527 YER188C-AYER188C-A 300 nt2.05□□□□□ -2.08
TY1B-AO13527 RPB5YBR154C 648 nt2.05□□□□□ -2.08
TY1B-AO13527 UBR2YLR024C 5619 nt2.04□□□□□ -2.08
TY1B-AO13527 YLR171WYLR171W 390 nt2.04□□□□□ -2.08
TY1B-AO13527 NAM7YMR080C 2916 nt2.04□□□□□ -2.08
TY1B-AO13527 DDR48YMR173W 1293 nt2.04□□□□□ -2.08
TY1B-AO13527 YOR248WYOR248W 303 nt2.04□□□□□ -2.08
TY1B-AO13527 MYO4YAL029C 4416 nt2.04□□□□□ -2.08
TY1B-AO13527 PKH3YDR466W 2697 nt2.04□□□□□ -2.08
TY1B-AO13527 IRC20YLR247C 4671 nt2.03□□□□□ -2.08
TY1B-AO13527 SET2YJL168C 2202 nt2.03□□□□□ -2.08
TY1B-AO13527 ASM4YDL088C 1587 nt2.03□□□□□ -2.08
TY1B-AO13527 YER068C-AYER068C-A 432 nt2.03□□□□□ -2.08
TY1B-AO13527 BI2Q0110 1272 nt2.03□□□□□ -2.08
TY1B-AO13527 VAR1Q0140 1197 nt2.03□□□□□ -2.08
TY1B-AO13527 YML108WYML108W 318 nt2.03□□□□□ -2.08
TY1B-AO13527 YMR272W-BYMR272W-B 108 nt2.03□□□□□ -2.08
TY1B-AO13527 RUF22RUF22 515 nt2.03□□□□□ -2.08
TY1B-AO13527 VPS52YDR484W 1926 nt2.03□□□□□ -2.08
TY1B-AO13527 SYH1YPL105C 2550 nt2.03□□□□□ -2.09
TY1B-AO13527 YLR422WYLR422W 5799 nt2.02□□□□□ -2.09
TY1B-AO13527 YNL144CYNL144C 2223 nt2.02□□□□□ -2.09
TY1B-AO13527 GCN2YDR283C 4980 nt2.02□□□□□ -2.09
TY1B-AO13527 YDL041WYDL041W 354 nt2.02□□□□□ -2.09
TY1B-AO13527 YER084W-AYER084W-A 513 nt2.02□□□□□ -2.09
TY1B-AO13527 RPF1YHR088W 888 nt2.02□□□□□ -2.09
TY1B-AO13527 YHR214W-AYHR214W-A 486 nt2.02□□□□□ -2.09
TY1B-AO13527 YLR053CYLR053C 327 nt2.02□□□□□ -2.09
TY1B-AO13527 YAR068WYAR068W 486 nt2.02□□□□□ -2.09
TY1B-AO13527 YOR032W-AYOR032W-A 201 nt2.02□□□□□ -2.09
TY1B-AO13527 SNC2YOR327C 348 nt2.02□□□□□ -2.09
TY1B-AO13527 RIC1YLR039C 3171 nt2.02□□□□□ -2.09
TY1B-AO13527 YDR341CYDR341C 1824 nt2.02□□□□□ -2.09
TY1B-AO13527 VPS35YJL154C 2835 nt2.02□□□□□ -2.09
TY1B-AO13527 MUD2YKL074C 1584 nt2.02□□□□□ -2.09
TY1B-AO13527 PPN1YDR452W 2025 nt2.01□□□□□ -2.09
TY1B-AO13527 TRM3YDL112W 4311 nt2.01□□□□□ -2.09
TY1B-AO13527 IRC10YOL015W 1761 nt2.01□□□□□ -2.09
TY1B-AO13527 YOR192C-AYOR192C-A 1317 nt2.01□□□□□ -2.09
TY1B-AO13527 VPS34YLR240W 2628 nt2.01□□□□□ -2.09
TY1B-AO13527 HMLALPHA2YCL067C 633 nt2.01□□□□□ -2.09
TY1B-AO13527 MATALPHA2YCR039C 633 nt2.01□□□□□ -2.09
TY1B-AO13527 TEN1YLR010C 483 nt2.01□□□□□ -2.09
TY1B-AO13527 SEC22YLR268W 645 nt2.01□□□□□ -2.09
TY1B-AO13527 SAR1YPL218W 573 nt2.01□□□□□ -2.09
TY1B-AO13527 SPO22YIL073C 2928 nt2□□□□□ -2.09
TY1B-AO13527 PAU3YCR104W 375 nt2□□□□□ -2.09
TY1B-AO13527 YDL118WYDL118W 381 nt2□□□□□ -2.09
TY1B-AO13527 ECL1YGR146C 636 nt2□□□□□ -2.09
TY1B-AO13527 YJL007CYJL007C 315 nt2□□□□□ -2.09
TY1B-AO13527 YJR157WYJR157W 363 nt2□□□□□ -2.09
TY1B-AO13527 YMR324CYMR324C 243 nt2□□□□□ -2.09
TY1B-AO13527 YPR039WYPR039W 336 nt2□□□□□ -2.09
TY1B-AO13527 snR54snR54 86 nt2□□□□□ -2.09
TY1B-AO13527 ADR1YDR216W 3972 nt1.99□□□□□ -2.09
TY1B-AO13527 RVS161YCR009C 798 nt1.99□□□□□ -2.09
TY1B-AO13527 YDR286CYDR286C 345 nt1.99□□□□□ -2.09
TY1B-AO13527 ATP17YDR377W 306 nt1.99□□□□□ -2.09
TY1B-AO13527 YEL030C-AYEL030C-A 315 nt1.99□□□□□ -2.09
TY1B-AO13527 IES5YER092W 378 nt1.99□□□□□ -2.09
TY1B-AO13527 YGL024WYGL024W 336 nt1.99□□□□□ -2.09
TY1B-AO13527 YHR210CYHR210C 1026 nt1.99□□□□□ -2.09
TY1B-AO13527 RTC6YPL183W-A 282 nt1.99□□□□□ -2.09
TY1B-AO13527 TSC3YBR058C-A 243 nt1.99□□□□□ -2.09
TY1B-AO13527 YPR177CYPR177C 372 nt1.99□□□□□ -2.09
TY1B-AO13527 TFC8YPL007C 1767 nt1.99□□□□□ -2.09
TY1B-AO13527 YCR001WYCR001W 315 nt1.98□□□□□ -2.09
TY1B-AO13527 YCR087C-AYCR087C-A 462 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 57.7 ms