Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.39■□□□□ 0.85
TRIM38O00635 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM38O00635 GCSHP5-201ENST00000443090 522 ntBASIC20.39■□□□□ 0.85
TRIM38O00635 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM38O00635 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.39■□□□□ 0.85
TRIM38O00635 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM38O00635 AC006058.3-201ENST00000606217 1069 ntBASIC20.39■□□□□ 0.85
TRIM38O00635 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM38O00635 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM38O00635 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM38O00635 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM38O00635 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM38O00635 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM38O00635 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM38O00635 LSM12P1-201ENST00000411836 588 ntBASIC20.38■□□□□ 0.85
TRIM38O00635 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.38■□□□□ 0.85
TRIM38O00635 AL355472.2-201ENST00000422958 438 ntBASIC20.38■□□□□ 0.85
TRIM38O00635 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM38O00635 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM38O00635 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM38O00635 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM38O00635 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM38O00635 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM38O00635 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM38O00635 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM38O00635 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM38O00635 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 AC128676.1-201ENST00000454392 318 ntBASIC20.37■□□□□ 0.85
TRIM38O00635 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM38O00635 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM38O00635 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM38O00635 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM38O00635 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM38O00635 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM38O00635 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 AC091799.1-201ENST00000422823 811 ntBASIC20.36■□□□□ 0.85
TRIM38O00635 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM38O00635 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.36■□□□□ 0.85
TRIM38O00635 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM38O00635 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM38O00635 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TRIM38O00635 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM38O00635 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 KRT17P1-201ENST00000399211 1546 ntBASIC20.36■□□□□ 0.85
TRIM38O00635 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM38O00635 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM38O00635 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM38O00635 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
TRIM38O00635 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM38O00635 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
TRIM38O00635 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM38O00635 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM38O00635 AL158047.1-201ENST00000445918 881 ntBASIC20.35■□□□□ 0.85
TRIM38O00635 UNC93B5-201ENST00000530315 699 ntBASIC20.35■□□□□ 0.85
TRIM38O00635 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM38O00635 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM38O00635 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM38O00635 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM38O00635 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
TRIM38O00635 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM38O00635 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM38O00635 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM38O00635 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM38O00635 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms