Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN5O00501 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN5O00501 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLDN5O00501 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.47■■□□□ 1.03
CLDN5O00501 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLDN5O00501 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN5O00501 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN5O00501 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN5O00501 HLA-B-256ENST00000639848 1089 ntBASIC21.47■■□□□ 1.03
CLDN5O00501 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN5O00501 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLDN5O00501 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN5O00501 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN5O00501 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.46■■□□□ 1.03
CLDN5O00501 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 AC060766.5-201ENST00000590539 871 ntBASIC21.46■■□□□ 1.03
CLDN5O00501 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLDN5O00501 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.46■■□□□ 1.03
CLDN5O00501 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLDN5O00501 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
CLDN5O00501 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CLDN5O00501 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN5O00501 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 AC092368.3-202ENST00000574180 1591 ntBASIC21.45■■□□□ 1.02
CLDN5O00501 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.45■■□□□ 1.02
CLDN5O00501 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
CLDN5O00501 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CLDN5O00501 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.45■■□□□ 1.02
CLDN5O00501 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.45■■□□□ 1.02
CLDN5O00501 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.45■■□□□ 1.02
CLDN5O00501 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN5O00501 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.45■■□□□ 1.02
CLDN5O00501 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN5O00501 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CLDN5O00501 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN5O00501 UNC93B5-201ENST00000530315 699 ntBASIC21.44■■□□□ 1.02
CLDN5O00501 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.44■■□□□ 1.02
CLDN5O00501 PNMA6B-201ENST00000538162 1200 ntBASIC21.44■■□□□ 1.02
CLDN5O00501 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CLDN5O00501 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN5O00501 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN5O00501 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.44■■□□□ 1.02
CLDN5O00501 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN5O00501 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.43■■□□□ 1.02
CLDN5O00501 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.43■■□□□ 1.02
CLDN5O00501 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLDN5O00501 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLDN5O00501 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.43■■□□□ 1.02
CLDN5O00501 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN5O00501 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms