Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.05■□□□□ 0.8
IFRD1O00458 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 MCRIP2P1-201ENST00000394346 511 ntBASIC20.05■□□□□ 0.8
IFRD1O00458 PGM5P4-201ENST00000421970 445 ntBASIC20.05■□□□□ 0.8
IFRD1O00458 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 AC104771.1-201ENST00000603335 964 ntBASIC20.05■□□□□ 0.8
IFRD1O00458 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.05■□□□□ 0.8
IFRD1O00458 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
IFRD1O00458 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFRD1O00458 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
IFRD1O00458 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.04■□□□□ 0.8
IFRD1O00458 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.04■□□□□ 0.8
IFRD1O00458 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.04■□□□□ 0.8
IFRD1O00458 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
IFRD1O00458 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFRD1O00458 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
IFRD1O00458 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.03■□□□□ 0.8
IFRD1O00458 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.03■□□□□ 0.8
IFRD1O00458 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 CYP21A1P-202ENST00000354927 1481 ntBASIC20.03■□□□□ 0.8
IFRD1O00458 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
IFRD1O00458 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
IFRD1O00458 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
IFRD1O00458 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFRD1O00458 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.03■□□□□ 0.8
IFRD1O00458 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFRD1O00458 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.02■□□□□ 0.8
IFRD1O00458 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.02■□□□□ 0.8
IFRD1O00458 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFRD1O00458 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.02■□□□□ 0.8
IFRD1O00458 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
IFRD1O00458 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFRD1O00458 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.02■□□□□ 0.8
IFRD1O00458 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
IFRD1O00458 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFRD1O00458 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFRD1O00458 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.02■□□□□ 0.8
IFRD1O00458 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
IFRD1O00458 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
IFRD1O00458 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFRD1O00458 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFRD1O00458 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
IFRD1O00458 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.01■□□□□ 0.79
IFRD1O00458 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.01■□□□□ 0.79
IFRD1O00458 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.01■□□□□ 0.79
IFRD1O00458 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
IFRD1O00458 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.01■□□□□ 0.79
IFRD1O00458 CYP2T3P-201ENST00000601990 817 ntBASIC20.01■□□□□ 0.79
IFRD1O00458 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.01■□□□□ 0.79
IFRD1O00458 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.01■□□□□ 0.79
IFRD1O00458 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.01■□□□□ 0.79
IFRD1O00458 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
IFRD1O00458 PLK5-205ENST00000642079 1969 ntBASIC20.01■□□□□ 0.79
IFRD1O00458 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFRD1O00458 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20■□□□□ 0.79
IFRD1O00458 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20■□□□□ 0.79
IFRD1O00458 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20■□□□□ 0.79
IFRD1O00458 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFRD1O00458 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
IFRD1O00458 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20■□□□□ 0.79
IFRD1O00458 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFRD1O00458 AL355802.2-201ENST00000402069 882 ntBASIC20■□□□□ 0.79
IFRD1O00458 LSM12P1-201ENST00000411836 588 ntBASIC20■□□□□ 0.79
IFRD1O00458 BX276092.2-201ENST00000417668 665 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms