Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CACNB4O00305 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNB4O00305 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNB4O00305 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNB4O00305 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNB4O00305 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNB4O00305 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.09■□□□□ 0.81
CACNB4O00305 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNB4O00305 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CACNB4O00305 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CACNB4O00305 MIR2861-201ENST00000636310 90 ntBASIC20.09■□□□□ 0.81
CACNB4O00305 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNB4O00305 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.08■□□□□ 0.81
CACNB4O00305 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CACNB4O00305 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.08■□□□□ 0.81
CACNB4O00305 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.08■□□□□ 0.81
CACNB4O00305 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNB4O00305 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 AC128676.1-201ENST00000454392 318 ntBASIC20.08■□□□□ 0.81
CACNB4O00305 UNC93B4-201ENST00000505679 747 ntBASIC20.08■□□□□ 0.81
CACNB4O00305 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNB4O00305 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.08■□□□□ 0.81
CACNB4O00305 SOX15-203ENST00000570788 1093 ntBASIC20.08■□□□□ 0.81
CACNB4O00305 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
CACNB4O00305 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNB4O00305 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNB4O00305 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CACNB4O00305 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CACNB4O00305 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CACNB4O00305 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.8
CACNB4O00305 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CACNB4O00305 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CACNB4O00305 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CACNB4O00305 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CACNB4O00305 PRORSD1P-201ENST00000295112 541 ntBASIC20.07■□□□□ 0.8
CACNB4O00305 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.07■□□□□ 0.8
CACNB4O00305 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.07■□□□□ 0.8
CACNB4O00305 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.07■□□□□ 0.8
CACNB4O00305 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.07■□□□□ 0.8
CACNB4O00305 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CACNB4O00305 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CACNB4O00305 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CACNB4O00305 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.06■□□□□ 0.8
CACNB4O00305 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.06■□□□□ 0.8
CACNB4O00305 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CACNB4O00305 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.06■□□□□ 0.8
CACNB4O00305 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 AC026310.3-201ENST00000625186 2373 ntBASIC20.06■□□□□ 0.8
CACNB4O00305 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CACNB4O00305 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.06■□□□□ 0.8
CACNB4O00305 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 KRT8P36-201ENST00000489121 1440 ntBASIC20.06■□□□□ 0.8
CACNB4O00305 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.06■□□□□ 0.8
CACNB4O00305 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 AC008687.6-201ENST00000596318 630 ntBASIC20.06■□□□□ 0.8
CACNB4O00305 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CACNB4O00305 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CACNB4O00305 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CACNB4O00305 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CACNB4O00305 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CACNB4O00305 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.05■□□□□ 0.8
CACNB4O00305 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
CACNB4O00305 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.05■□□□□ 0.8
CACNB4O00305 AC008403.3-201ENST00000598924 454 ntBASIC20.05■□□□□ 0.8
CACNB4O00305 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.05■□□□□ 0.8
CACNB4O00305 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB4O00305 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms