Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC1O00299 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC1O00299 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC1O00299 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC1O00299 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 AC091799.1-201ENST00000422823 811 ntBASIC19.13■□□□□ 0.65
CLIC1O00299 AC123595.1-201ENST00000440769 1046 ntBASIC19.13■□□□□ 0.65
CLIC1O00299 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.13■□□□□ 0.65
CLIC1O00299 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.13■□□□□ 0.65
CLIC1O00299 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC1O00299 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC1O00299 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC1O00299 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLIC1O00299 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.12■□□□□ 0.65
CLIC1O00299 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC1O00299 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC1O00299 AC243732.1-201ENST00000612648 864 ntBASIC19.12■□□□□ 0.65
CLIC1O00299 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC1O00299 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC1O00299 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC1O00299 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CLIC1O00299 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC1O00299 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC1O00299 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC1O00299 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC1O00299 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 KRT8P36-201ENST00000489121 1440 ntBASIC19.11■□□□□ 0.65
CLIC1O00299 RBM17P2-201ENST00000616397 1405 ntBASIC19.11■□□□□ 0.65
CLIC1O00299 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC1O00299 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC1O00299 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.11■□□□□ 0.65
CLIC1O00299 TERF1P2-201ENST00000583350 1212 ntBASIC19.11■□□□□ 0.65
CLIC1O00299 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC1O00299 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC1O00299 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC1O00299 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 AC007322.3-201ENST00000426526 701 ntBASIC19.1■□□□□ 0.65
CLIC1O00299 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIC1O00299 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.1■□□□□ 0.65
CLIC1O00299 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC1O00299 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLIC1O00299 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC1O00299 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms