Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.89■□□□□ 0.93
DFFAO00273 AL121832.2-201ENST00000610979 668 ntBASIC20.89■□□□□ 0.93
DFFAO00273 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.89■□□□□ 0.93
DFFAO00273 AL356652.1-201ENST00000615962 565 ntBASIC20.89■□□□□ 0.93
DFFAO00273 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.89■□□□□ 0.93
DFFAO00273 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.89■□□□□ 0.93
DFFAO00273 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DFFAO00273 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DFFAO00273 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 MKRN4P-201ENST00000444706 1521 ntBASIC20.88■□□□□ 0.93
DFFAO00273 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
DFFAO00273 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.88■□□□□ 0.93
DFFAO00273 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
DFFAO00273 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
DFFAO00273 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
DFFAO00273 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.88■□□□□ 0.93
DFFAO00273 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.88■□□□□ 0.93
DFFAO00273 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 CYP2T3P-201ENST00000601990 817 ntBASIC20.88■□□□□ 0.93
DFFAO00273 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.88■□□□□ 0.93
DFFAO00273 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DFFAO00273 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.88■□□□□ 0.93
DFFAO00273 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DFFAO00273 AC092667.1-201ENST00000434301 2586 ntBASIC20.88■□□□□ 0.93
DFFAO00273 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 KRT8P36-201ENST00000489121 1440 ntBASIC20.87■□□□□ 0.93
DFFAO00273 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
DFFAO00273 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.87■□□□□ 0.93
DFFAO00273 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.87■□□□□ 0.93
DFFAO00273 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.87■□□□□ 0.93
DFFAO00273 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.87■□□□□ 0.93
DFFAO00273 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.87■□□□□ 0.93
DFFAO00273 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
DFFAO00273 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DFFAO00273 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.87■□□□□ 0.93
DFFAO00273 LINC01006-201ENST00000333319 2292 ntBASIC20.87■□□□□ 0.93
DFFAO00273 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.86■□□□□ 0.93
DFFAO00273 KRT18P68-201ENST00000392293 1000 ntBASIC20.86■□□□□ 0.93
DFFAO00273 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.86■□□□□ 0.93
DFFAO00273 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.86■□□□□ 0.93
DFFAO00273 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.86■□□□□ 0.93
DFFAO00273 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.86■□□□□ 0.93
DFFAO00273 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.86■□□□□ 0.93
DFFAO00273 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.86■□□□□ 0.93
DFFAO00273 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DFFAO00273 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
DFFAO00273 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DFFAO00273 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
DFFAO00273 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 GPX1P1-201ENST00000388829 606 ntBASIC20.85■□□□□ 0.93
DFFAO00273 NCF1B-203ENST00000435988 1254 ntBASIC20.85■□□□□ 0.93
DFFAO00273 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.85■□□□□ 0.93
DFFAO00273 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.85■□□□□ 0.93
DFFAO00273 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.85■□□□□ 0.93
DFFAO00273 AC092720.2-201ENST00000602388 1665 ntBASIC20.85■□□□□ 0.93
DFFAO00273 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DFFAO00273 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
DFFAO00273 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DFFAO00273 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.84■□□□□ 0.93
DFFAO00273 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms