Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC142381.4-202ENST00000563973 229 ntBASIC20.22■□□□□ 0.83
H3BM21 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.22■□□□□ 0.83
H3BM21 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 AC105020.6-201ENST00000621523 1217 ntBASIC20.22■□□□□ 0.83
H3BM21 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H3BM21 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H3BM21 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.22■□□□□ 0.83
H3BM21 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
H3BM21 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H3BM21 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
H3BM21 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 AC092368.3-202ENST00000574180 1591 ntBASIC20.21■□□□□ 0.83
H3BM21 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 AC011484.1-201ENST00000377652 1995 ntBASIC20.21■□□□□ 0.83
H3BM21 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
H3BM21 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.21■□□□□ 0.83
H3BM21 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
H3BM21 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
H3BM21 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.21■□□□□ 0.83
H3BM21 AL158047.1-201ENST00000445918 881 ntBASIC20.21■□□□□ 0.83
H3BM21 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
H3BM21 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.21■□□□□ 0.83
H3BM21 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3BM21 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
H3BM21 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
H3BM21 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
H3BM21 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.2■□□□□ 0.82
H3BM21 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.2■□□□□ 0.82
H3BM21 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.2■□□□□ 0.82
H3BM21 PGM5P4-201ENST00000421970 445 ntBASIC20.2■□□□□ 0.82
H3BM21 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.2■□□□□ 0.82
H3BM21 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 PNMA6B-201ENST00000538162 1200 ntBASIC20.2■□□□□ 0.82
H3BM21 AC073648.6-201ENST00000641589 218 ntBASIC20.2■□□□□ 0.82
H3BM21 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H3BM21 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.2■□□□□ 0.82
H3BM21 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
H3BM21 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.19■□□□□ 0.82
H3BM21 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.19■□□□□ 0.82
H3BM21 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
H3BM21 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.18■□□□□ 0.82
H3BM21 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
H3BM21 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
H3BM21 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
H3BM21 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.18■□□□□ 0.82
H3BM21 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.18■□□□□ 0.82
H3BM21 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.18■□□□□ 0.82
H3BM21 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.18■□□□□ 0.82
H3BM21 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.18■□□□□ 0.82
H3BM21 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
H3BM21 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
H3BM21 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3BM21 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
H3BM21 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.18■□□□□ 0.82
H3BM21 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.17■□□□□ 0.82
H3BM21 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.17■□□□□ 0.82
H3BM21 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.17■□□□□ 0.82
H3BM21 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H3BM21 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms