Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM4A7MD48 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.36■□□□□ 0.21
SRRM4A7MD48 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 AC137761.2-201ENST00000561729 223 ntBASIC16.35■□□□□ 0.21
SRRM4A7MD48 AC145350.3-201ENST00000569033 163 ntBASIC16.35■□□□□ 0.21
SRRM4A7MD48 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRRM4A7MD48 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SRRM4A7MD48 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.34■□□□□ 0.21
SRRM4A7MD48 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 RARRES2P6-201ENST00000567333 442 ntBASIC16.34■□□□□ 0.21
SRRM4A7MD48 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 AL591742.1-201ENST00000604433 565 ntBASIC16.34■□□□□ 0.21
SRRM4A7MD48 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.34■□□□□ 0.21
SRRM4A7MD48 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM4A7MD48 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SRRM4A7MD48 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SRRM4A7MD48 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM4A7MD48 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 KRT18P11-201ENST00000435214 1283 ntBASIC16.33■□□□□ 0.2
SRRM4A7MD48 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms