Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 RBM17P2-201ENST00000616397 1405 ntBASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF4LA6NMK7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPSF4LA6NMK7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPSF4LA6NMK7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CPSF4LA6NMK7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 AC091799.1-201ENST00000422823 811 ntBASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 SMG8-203ENST00000578922 2178 ntBASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 AC138932.1-201ENST00000534164 6830 ntBASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
CPSF4LA6NMK7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
CPSF4LA6NMK7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 AC007322.3-201ENST00000426526 701 ntBASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 AC243732.1-201ENST00000612648 864 ntBASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.68■□□□□ 0.58
CPSF4LA6NMK7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms