Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 TMEM179-206ENST00000616017 1645 ntBASIC14.43□□□□□ -0.1
LINC01549A6NIU2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 AC055733.4-201ENST00000638462 1354 ntBASIC14.43□□□□□ -0.1
LINC01549A6NIU2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01549A6NIU2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01549A6NIU2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC01549A6NIU2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.4□□□□□ -0.1
LINC01549A6NIU2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 AC103834.1-201ENST00000520383 144 ntBASIC14.4□□□□□ -0.1
LINC01549A6NIU2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 AC010997.5-201ENST00000609182 354 ntBASIC14.4□□□□□ -0.1
LINC01549A6NIU2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01549A6NIU2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01549A6NIU2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01549A6NIU2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01549A6NIU2 OR6D1P-202ENST00000641007 5290 ntBASIC14.39□□□□□ -0.11
LINC01549A6NIU2 AP000974.1-201ENST00000623909 2387 ntBASIC14.39□□□□□ -0.11
LINC01549A6NIU2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01549A6NIU2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01549A6NIU2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms