Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 RARRES2P6-201ENST00000567333 442 ntBASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL512408.1-201ENST00000569378 2000 ntBASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-4A0A1B0GX49 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.33□□□□□ -0.11
TRBV6-4A0A1B0GX49 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-4A0A1B0GX49 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-4A0A1B0GX49 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-4A0A1B0GX49 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-4A0A1B0GX49 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-4A0A1B0GX49 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC026271.2-201ENST00000428091 497 ntBASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC087633.2-202ENST00000565166 1439 ntBASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-4A0A1B0GX49 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 MIR5787-201ENST00000611784 55 ntBASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms