Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.87■■□□□ 1.09
SMIM28A0A1B0GU29 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM28A0A1B0GU29 AC006128.1-201ENST00000624704 1661 ntBASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 GCSHP5-201ENST00000443090 522 ntBASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 AC006557.6-201ENST00000623071 864 ntBASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM28A0A1B0GU29 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 KRT17P3-201ENST00000420566 1262 ntBASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 RPS2P52-201ENST00000469610 820 ntBASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM28A0A1B0GU29 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 POM121L13P-201ENST00000422362 380 ntBASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 AC233263.1-201ENST00000578059 224 ntBASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMIM28A0A1B0GU29 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.83■■□□□ 1.08
SMIM28A0A1B0GU29 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMIM28A0A1B0GU29 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 FP700111.2-201ENST00000619190 1892 ntBASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 AC142381.4-202ENST00000563973 229 ntBASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SMIM28A0A1B0GU29 AC007375.3-201ENST00000600936 2314 ntBASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
SMIM28A0A1B0GU29 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms