Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 AC019069.1-201ENST00000610008 1333 ntBASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV10-1A0A0K0K1A3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV10-1A0A0K0K1A3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV10-1A0A0K0K1A3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
TRBV10-1A0A0K0K1A3 AC004854.2-201ENST00000608450 1441 ntBASIC14.33□□□□□ -0.11
TRBV10-1A0A0K0K1A3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV10-1A0A0K0K1A3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV10-1A0A0K0K1A3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms