Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-5A0A0J9YX44 AL691432.2-201ENST00000607222 2038 ntBASIC17.64■□□□□ 0.41
TRBV5-5A0A0J9YX44 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-5A0A0J9YX44 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV5-5A0A0J9YX44 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 BX119927.1-201ENST00000636596 1552 ntBASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-5A0A0J9YX44 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-5A0A0J9YX44 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 AL020996.1-203ENST00000536896 2307 ntBASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV5-5A0A0J9YX44 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC098818.2-201ENST00000564925 2320 ntBASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 IRS3P-201ENST00000223076 1006 ntBASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 SLC7A5P2-201ENST00000553010 536 ntBASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-5A0A0J9YX44 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-5A0A0J9YX44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms