Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC145285.6-201ENST00000604632 637 ntBASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LOC102724428A0A0B4J2F2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC023632.3-201ENST00000521633 145 ntBASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 MIR6786-201ENST00000616843 113 ntBASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.06■■□□□ 1.76
LOC102724428A0A0B4J2F2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC073195.1-201ENST00000607241 877 ntBASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC092865.7-201ENST00000641832 219 ntBASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 KRT8P9-201ENST00000558927 1449 ntBASIC26.05■■□□□ 1.76
LOC102724428A0A0B4J2F2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 RBM17P1-201ENST00000453646 1190 ntBASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
LOC102724428A0A0B4J2F2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 ARMC10P1-201ENST00000313754 855 ntBASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC079598.2-202ENST00000546624 1451 ntBASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LOC102724428A0A0B4J2F2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 AC242852.2-201ENST00000615738 1807 ntBASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.02■■□□□ 1.76
LOC102724428A0A0B4J2F2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 NUDT16P1-203ENST00000513809 620 ntBASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.01■■□□□ 1.75
LOC102724428A0A0B4J2F2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms