Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 AC020907.5-201ENST00000624372 1936 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 AC091799.1-201ENST00000422823 811 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 CDV3P1-201ENST00000471403 739 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 NTF6G-201ENST00000591094 616 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 UBE2DNL-204ENST00000602536 740 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 MIR6821-201ENST00000617625 74 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 MYCNOS-205ENST00000641950 531 ntBASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV4A0A0B4J268 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV4A0A0B4J268 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 KRT18P11-201ENST00000435214 1283 ntBASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 MIR2861-201ENST00000636310 90 ntBASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV4A0A0B4J268 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV4A0A0B4J268 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
TRAV4A0A0B4J268 AC092720.2-201ENST00000602388 1665 ntBASIC14.58□□□□□ -0.07
TRAV4A0A0B4J268 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV4A0A0B4J268 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV4A0A0B4J268 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 KRT18P61-201ENST00000585825 1298 ntBASIC14.58□□□□□ -0.08
TRAV4A0A0B4J268 FAM21FP-204ENST00000608637 956 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms