Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 KRT8P36-201ENST00000489121 1440 ntBASIC16■□□□□ 0.15
TRAV41A0A0B4J266 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV41A0A0B4J266 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV41A0A0B4J266 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 AL138781.1-201ENST00000566567 1274 ntBASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV41A0A0B4J266 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 AL121603.2-201ENST00000557373 2117 ntBASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
TRAV41A0A0B4J266 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 AC142086.2-201ENST00000569753 217 ntBASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 AC133041.1-202ENST00000642053 222 ntBASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms