Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.07□□□□□ -0.96
MTHFRP42898 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
MTHFRP42898 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC9.07□□□□□ -0.96
MTHFRP42898 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.07□□□□□ -0.96
MTHFRP42898 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
MTHFRP42898 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
MTHFRP42898 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MTHFRP42898 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MTHFRP42898 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
MTHFRP42898 AC022306.1-201ENST00000560489 1562 ntBASIC9.07□□□□□ -0.96
MTHFRP42898 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC9.07□□□□□ -0.96
MTHFRP42898 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MTHFRP42898 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MTHFRP42898 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC9.07□□□□□ -0.96
MTHFRP42898 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
MTHFRP42898 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.06□□□□□ -0.96
MTHFRP42898 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9.06□□□□□ -0.96
MTHFRP42898 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
MTHFRP42898 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
MTHFRP42898 SLC25A24P1-202ENST00000434803 1220 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 RN7SL241P-201ENST00000482973 236 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 HNRNPA1P20-201ENST00000484852 955 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 RN7SL519P-201ENST00000497925 288 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC9.06□□□□□ -0.96
MTHFRP42898 AL162311.2-201ENST00000550416 709 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC9.06□□□□□ -0.96
MTHFRP42898 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC9.06□□□□□ -0.96
MTHFRP42898 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC9.06□□□□□ -0.96
MTHFRP42898 AC044798.2-201ENST00000564222 1235 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC9.06□□□□□ -0.96
MTHFRP42898 AC087645.1-201ENST00000588528 291 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 RNF157-207ENST00000592271 755 ntTSL 2 BASIC9.06□□□□□ -0.96
MTHFRP42898 EIF5P2-201ENST00000618904 1035 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 AC073488.11-201ENST00000633298 754 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC9.06□□□□□ -0.96
MTHFRP42898 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 AC074281.1-201ENST00000436419 2081 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 AC021491.4-201ENST00000620769 2573 ntBASIC9.06□□□□□ -0.96
MTHFRP42898 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
MTHFRP42898 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MTHFRP42898 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 AL023280.1-201ENST00000414840 1423 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 AHCYP5-201ENST00000331585 1238 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC9.05□□□□□ -0.96
MTHFRP42898 RN7SL218P-201ENST00000464637 299 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 RPL17P37-201ENST00000490729 548 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 RN7SL862P-201ENST00000491550 298 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 MYADML-203ENST00000491596 951 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
MTHFRP42898 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC9.05□□□□□ -0.96
MTHFRP42898 JPT1-211ENST00000581874 517 ntTSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC9.05□□□□□ -0.96
MTHFRP42898 AL121917.2-201ENST00000605044 390 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 AC113349.2-201ENST00000607804 377 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 AC243830.3-201ENST00000616810 376 ntBASIC9.05□□□□□ -0.96
MTHFRP42898 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms