Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 AL049636.1-201ENST00000455736 1357 ntBASIC7.84□□□□□ -1.15
P04436 GLULP5-201ENST00000547831 1390 ntBASIC7.84□□□□□ -1.15
P04436 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
P04436 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC7.84□□□□□ -1.15
P04436 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 PPP4R1L-202ENST00000334187 2746 ntBASIC7.84□□□□□ -1.15
P04436 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 AC013391.3-201ENST00000567484 1456 ntBASIC7.84□□□□□ -1.15
P04436 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
P04436 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
P04436 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 MIR425-201ENST00000362162 87 ntBASIC7.84□□□□□ -1.15
P04436 MIR1184-2-201ENST00000408263 99 ntBASIC7.84□□□□□ -1.15
P04436 MIR1184-1-201ENST00000408606 99 ntBASIC7.84□□□□□ -1.15
P04436 MIR1184-3-201ENST00000408676 99 ntBASIC7.84□□□□□ -1.15
P04436 VN2R10P-201ENST00000411871 853 ntBASIC7.84□□□□□ -1.15
P04436 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC7.84□□□□□ -1.15
P04436 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.84□□□□□ -1.15
P04436 AC239367.1-201ENST00000439389 936 ntBASIC7.84□□□□□ -1.15
P04436 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 RN7SL745P-201ENST00000484900 299 ntBASIC7.84□□□□□ -1.15
P04436 GAPDHP22-201ENST00000491037 413 ntBASIC7.84□□□□□ -1.15
P04436 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 IGHVII-30-1-201ENST00000522218 301 ntBASIC7.84□□□□□ -1.15
P04436 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC7.84□□□□□ -1.15
P04436 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.84□□□□□ -1.15
P04436 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.84□□□□□ -1.15
P04436 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
P04436 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
P04436 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.84□□□□□ -1.15
P04436 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC7.84□□□□□ -1.15
P04436 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
P04436 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
P04436 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
P04436 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
P04436 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
P04436 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 AC074281.1-201ENST00000436419 2081 ntBASIC7.83□□□□□ -1.16
P04436 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
P04436 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC7.83□□□□□ -1.16
P04436 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
P04436 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.83□□□□□ -1.16
P04436 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
P04436 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
P04436 MED28P1-201ENST00000399158 571 ntBASIC7.83□□□□□ -1.16
P04436 AL136968.2-201ENST00000407959 354 ntBASIC7.83□□□□□ -1.16
P04436 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
P04436 ATP5HP4-201ENST00000414313 475 ntBASIC7.83□□□□□ -1.16
P04436 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.83□□□□□ -1.16
P04436 AL122003.1-201ENST00000435206 784 ntBASIC7.83□□□□□ -1.16
P04436 CFL1P8-201ENST00000436148 475 ntBASIC7.83□□□□□ -1.16
P04436 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
P04436 AC026444.1-201ENST00000502592 496 ntBASIC7.83□□□□□ -1.16
P04436 BX293995.1-201ENST00000502880 755 ntBASIC7.83□□□□□ -1.16
P04436 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC7.83□□□□□ -1.16
P04436 AC006499.1-201ENST00000511870 850 ntBASIC7.83□□□□□ -1.16
P04436 ELL2P2-201ENST00000515135 694 ntBASIC7.83□□□□□ -1.16
P04436 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.83□□□□□ -1.16
P04436 AC044836.1-201ENST00000519514 274 ntBASIC7.83□□□□□ -1.16
P04436 AC021006.2-201ENST00000526978 859 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 AC089998.3-201ENST00000549715 493 ntBASIC7.83□□□□□ -1.16
P04436 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 AC007952.7-201ENST00000583141 757 ntBASIC7.83□□□□□ -1.16
P04436 MIR4450-201ENST00000583589 65 ntBASIC7.83□□□□□ -1.16
P04436 SRP68P1-201ENST00000584247 269 ntBASIC7.83□□□□□ -1.16
P04436 AL021808.1-201ENST00000604325 1117 ntBASIC7.83□□□□□ -1.16
P04436 GPC6-202ENST00000617456 792 ntTSL 3 BASIC7.83□□□□□ -1.16
P04436 AL136038.5-201ENST00000620835 554 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms