Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 GUSBP6-202ENST00000438529 1198 ntBASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 GPX1P1-201ENST00000388829 606 ntBASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX49Q9Y6V7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.33■■□□□ 1.48
DDX49Q9Y6V7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.48
DDX49Q9Y6V7 PLK5-205ENST00000642079 1969 ntBASIC24.33■■□□□ 1.48
DDX49Q9Y6V7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 CNN2P6-201ENST00000439038 900 ntBASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 AC083906.2-201ENST00000511578 360 ntBASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX49Q9Y6V7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 AL138781.1-201ENST00000566567 1274 ntBASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 AC005181.1-201ENST00000604782 1256 ntBASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX49Q9Y6V7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 AP006587.3-201ENST00000525742 1516 ntBASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 AC003102.1-202ENST00000563394 1796 ntBASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 AC010141.2-201ENST00000452426 721 ntBASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 SLC7A5P2-201ENST00000553010 536 ntBASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX49Q9Y6V7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms