Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00588Q9Y4M8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AF106564.1-201ENST00000607058 2553 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC128676.1-201ENST00000454392 318 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 UNC93B4-201ENST00000505679 747 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 SOX15-203ENST00000570788 1093 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC008403.3-201ENST00000598924 454 ntBASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00588Q9Y4M8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 MIR2861-201ENST00000636310 90 ntBASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00588Q9Y4M8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00588Q9Y4M8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00588Q9Y4M8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00588Q9Y4M8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00588Q9Y4M8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00588Q9Y4M8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 AC073648.6-201ENST00000641589 218 ntBASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00588Q9Y4M8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00588Q9Y4M8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms