Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 EP400NL-214ENST00000641289 2402 ntBASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AC022616.7-201ENST00000525383 220 ntBASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AL034346.1-201ENST00000568244 1277 ntBASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AC023511.2-201ENST00000618803 211 ntBASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 AP000550.4-202ENST00000639755 178 ntBASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN4Q9Y3Q4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HCN4Q9Y3Q4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 FAM197Y1-201ENST00000421178 764 ntBASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCN4Q9Y3Q4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 AC120498.8-201ENST00000614275 531 ntBASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
HCN4Q9Y3Q4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.89■□□□□ 0.94
HCN4Q9Y3Q4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HCN4Q9Y3Q4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.89■□□□□ 0.94
HCN4Q9Y3Q4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN4Q9Y3Q4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 AK4P3-201ENST00000418260 669 ntBASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.88■□□□□ 0.93
HCN4Q9Y3Q4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms