Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 MTDHP2-201ENST00000601468 714 ntBASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 AL138781.2-201ENST00000617896 1843 ntBASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 AC093484.2-201ENST00000580996 2166 ntBASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 AC003102.1-202ENST00000563394 1796 ntBASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRCH1Q9Y2L9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRCH1Q9Y2L9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 AC079598.2-202ENST00000546624 1451 ntBASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 AC010997.5-201ENST00000609182 354 ntBASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.29■□□□□ 0.68
LRCH1Q9Y2L9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms