Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 AC091874.3-201ENST00000512672 1195 ntBASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FNDC3AQ9Y2H6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
FNDC3AQ9Y2H6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 AC010980.2-201ENST00000587099 1412 ntBASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 RBM17P2-201ENST00000616397 1405 ntBASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 AC006058.3-201ENST00000606217 1069 ntBASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FNDC3AQ9Y2H6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 AL158047.1-201ENST00000445918 881 ntBASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 AL591742.1-201ENST00000604433 565 ntBASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 AP006294.2-201ENST00000641667 209 ntBASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FNDC3AQ9Y2H6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms