Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK11AQ9UQ88 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 AC087499.1-201ENST00000418141 1075 ntBASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 AL121829.2-201ENST00000620908 328 ntBASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDK11AQ9UQ88 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 TSPY15P-201ENST00000457163 923 ntBASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK11AQ9UQ88 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
CDK11AQ9UQ88 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 AC011484.1-201ENST00000377652 1995 ntBASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 AC023632.3-201ENST00000521633 145 ntBASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC31.63■■■□□ 2.65
CDK11AQ9UQ88 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 GUSBP5-202ENST00000510805 1989 ntBASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 AL355075.4-201ENST00000554988 638 ntBASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 AC010331.1-201ENST00000611423 582 ntBASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 AC133561.5-201ENST00000635547 218 ntBASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 AC097493.4-201ENST00000641197 219 ntBASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
CDK11AQ9UQ88 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 AC012306.2-201ENST00000609350 630 ntBASIC31.61■■■□□ 2.65
CDK11AQ9UQ88 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.6■■■□□ 2.65
CDK11AQ9UQ88 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 KRT18P21-201ENST00000515767 1272 ntBASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK11AQ9UQ88 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms