Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRFN1Q9P244 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 AC008403.3-201ENST00000598924 454 ntBASIC18.7■□□□□ 0.58
LRFN1Q9P244 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 AC073648.6-201ENST00000641589 218 ntBASIC18.7■□□□□ 0.58
LRFN1Q9P244 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRFN1Q9P244 AL024507.2-201ENST00000606070 2574 ntBASIC18.7■□□□□ 0.58
LRFN1Q9P244 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN1Q9P244 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 AC098590.1-201ENST00000468126 897 ntBASIC18.69■□□□□ 0.58
LRFN1Q9P244 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LRFN1Q9P244 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN1Q9P244 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 KRT17P3-201ENST00000420566 1262 ntBASIC18.68■□□□□ 0.58
LRFN1Q9P244 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 AC142381.4-202ENST00000563973 229 ntBASIC18.68■□□□□ 0.58
LRFN1Q9P244 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 SOX15-203ENST00000570788 1093 ntBASIC18.68■□□□□ 0.58
LRFN1Q9P244 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN1Q9P244 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.68■□□□□ 0.58
LRFN1Q9P244 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 GCSHP5-201ENST00000443090 522 ntBASIC18.67■□□□□ 0.58
LRFN1Q9P244 AL158047.1-201ENST00000445918 881 ntBASIC18.67■□□□□ 0.58
LRFN1Q9P244 RPS2P52-201ENST00000469610 820 ntBASIC18.67■□□□□ 0.58
LRFN1Q9P244 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.67■□□□□ 0.58
LRFN1Q9P244 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 AL049796.1-201ENST00000565336 1766 ntBASIC18.67■□□□□ 0.58
LRFN1Q9P244 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.67■□□□□ 0.58
LRFN1Q9P244 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRFN1Q9P244 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.66■□□□□ 0.58
LRFN1Q9P244 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN1Q9P244 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN1Q9P244 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRFN1Q9P244 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN1Q9P244 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRFN1Q9P244 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRFN1Q9P244 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.66■□□□□ 0.58
LRFN1Q9P244 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms